TAP CCAAT_Dr1 in Spirogyra sp.

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Zygnemophyceae; Zygnematophycidae; Zygnematales; Zygnemataceae; Spirogyra; unclassified Spirogyra

Protein source: Delaux et al. (2015) Proc Natl Acad Sci U S A 112:13390-5


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

CCAAT-Dr1_Domain
NF-YB
NF-YC

(Domain names are clickable)



List of proteins (9)

hide all | show all
namename additionClick button to show/hide sequence: Download sequence?
c1_seq1_6_rccomp1151_c1_seq1_6 [588 - 43] (REVERSE SENSE) len=747 path=[725:0-746]
c1_seq10_2[263 - 745] len=1442 path=[5167:0-115 5283:116-249 7415:250-251 7439:252-252 363:253-631 742:632-741 6704:742-1039 852:1040-1441]
c1_seq12_1[161 - 643] len=1340 path=[7381:0-13 5283:14-147 7415:148-149 7439:150-150 363:151-529 742:530-639 6704:640-937 852:938-1339]
c1_seq15_2[263 - 745] len=1144 path=[5167:0-115 5283:116-249 7415:250-251 7439:252-252 363:253-631 742:632-741 852:742-1143]
c1_seq16_1[161 - 643] len=1042 path=[7381:0-13 5283:14-147 7415:148-149 7439:150-150 363:151-529 742:530-639 852:640-1041]
c1_seq5_2[263 - 673] len=1653 path=[5167:0-115 5283:116-249 7415:250-251 7439:252-252 363:253-631 5670:632-842 742:843-952 6704:953-1250 852:1251-1652]
c1_seq7_1[161 - 571] len=1551 path=[7381:0-13 5283:14-147 7415:148-149 7439:150-150 363:151-529 5670:530-740 742:741-850 6704:851-1148 852:1149-1550]
c0_seq3_4_rccomp8149_c0_seq3_4 [1463 - 930] (REVERSE SENSE) len=1661 path=[1:0-569 571:570-727 729:728-1221 1223:1222-1611 3892:1612-1624 1624:1625-1660]
c0_seq4_5_rccomp8149_c0_seq4_5 [1305 - 772] (REVERSE SENSE) len=1503 path=[1:0-569 729:570-1063 1223:1064-1453 3892:1454-1466 1624:1467-1502]
select all | unselect

A list of species letter codes included in the protein names can be found here (opens in new tab).

↑ back to top


¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum